SDA - Jmol 14.7.0

loadScript ../js/j2s/core/package.js

loadScript ../js/j2s/core/corejmol.z.js

JSmol exec SDA start applet null

Jmol JavaScript applet SDA__1535232939151707__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript true

AppletRegistry.checkIn(SDA__1535232939151707__)

vwrOptions:

{ "name":"SDA","allowJavaScript":true,"applet":true,"documentBase":"http://sda.denglab.org/cgi-bin/structurefor3D.cgi?query=d1te0a2","platform":"J.awtjs2d.Platform","fullName":"SDA__1535232939151707__","codePath":"http://sda.denglab.org/cgi-bin/../js/j2s/","display":"SDA_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"1535232939151707","bgcolor":"#FFFFFF" }

setting document base to "http://sda.denglab.org/cgi-bin/structurefor3D.cgi?query=d1te0a2"

Jmol Version: 14.7.0_2016.06.27 2016-06-27 01:32

java.vendor: Java2Script (HTML5)

java.version: 2016-05-08 13:20:27 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:SDA (signed)

loadScript ../js/j2s/core/corescript.z.js

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet SDA__1535232939151707__ ready

script 1 started

FileManager.getAtomSetCollectionFromFile(../js/data/d1te0a2.ent)

FileManager opening url http://sda.denglab.org/js/data/d1te0a2.ent

The Resolver thinks Pdb

loadScript ../js/j2s/core/corebio.z.js

SCOPe/ASTRAL domain d1te0a2 [112401] 15-FEB-16 0000

0000

Time for openFile(../js/data/d1te0a2.ent): 550 ms

reading 1601 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

1601 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 1.1 - 0000

W. Kabsch and C. Sander, Biopolymers, vol 22, 1983, pp 2577-2637

We thank Wolfgang Kabsch and Chris Sander for writing the DSSP software,

and we thank the CMBI for maintaining it to the extent that it was easy to

re-engineer in Java for our purposes.

Second generation DSSP 2.0 is used in this analysis. See Int. J. Mol. Sci. 2014, 15, 7841-7864; doi:10.3390/ijms15057841.

All bioshapes have been deleted and must be regenerated.

Time for creating model: 132 ms

SCOPe/ASTRAL domain d1te0a2 [112401] 15-FEB-16 0000

0000

1601 atoms selected

zoomLarge = false

antialiasDisplay = true

Script completed

Jmol script terminated

loadScript ../js/j2s/J/g3d/HermiteRenderer.js